CDS

Accession Number TCMCG017C14525
gbkey CDS
Protein Id OMO94196.1
Location complement(join(13945..14094,14231..14381,14484..14590,14671..14718,14824..14923,15008..15069,15162..15237,15326..15387,15508..15526,15625..15657,15756..15809,16285..16469))
GeneID InterPro:IPR002100
Organism Corchorus olitorius
locus_tag COLO4_16480

Protein

Length 348aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01016105.1
Definition Transcription factor, MADS-box [Corchorus olitorius]
Locus_tag COLO4_16480

EGGNOG-MAPPER Annotation

COG_category K
Description Transcription factor
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
KEGG_ko ko:K09260        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04013        [VIEW IN KEGG]
ko04022        [VIEW IN KEGG]
ko04371        [VIEW IN KEGG]
ko05418        [VIEW IN KEGG]
map04013        [VIEW IN KEGG]
map04022        [VIEW IN KEGG]
map04371        [VIEW IN KEGG]
map05418        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0001558        [VIEW IN EMBL-EBI]
GO:0003002        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007389        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0010016        [VIEW IN EMBL-EBI]
GO:0010152        [VIEW IN EMBL-EBI]
GO:0010229        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010622        [VIEW IN EMBL-EBI]
GO:0010769        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0021700        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022603        [VIEW IN EMBL-EBI]
GO:0022604        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0035670        [VIEW IN EMBL-EBI]
GO:0040008        [VIEW IN EMBL-EBI]
GO:0043900        [VIEW IN EMBL-EBI]
GO:0045595        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048281        [VIEW IN EMBL-EBI]
GO:0048283        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048437        [VIEW IN EMBL-EBI]
GO:0048438        [VIEW IN EMBL-EBI]
GO:0048440        [VIEW IN EMBL-EBI]
GO:0048444        [VIEW IN EMBL-EBI]
GO:0048445        [VIEW IN EMBL-EBI]
GO:0048467        [VIEW IN EMBL-EBI]
GO:0048481        [VIEW IN EMBL-EBI]
GO:0048482        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048638        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051510        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060284        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080092        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0090696        [VIEW IN EMBL-EBI]
GO:0090697        [VIEW IN EMBL-EBI]
GO:0090698        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGGCGTGTTAAACTGGAGATTAAGAGAATAGAAAACAACACAAATCGTCAGGTTACATTTTCAAAGCGTAGGAATGGGCTCATTAAGAAGGCTTATGAACTTTCCATCCTTTGTGACATTGATATTGCTCTTATCATGTTCTCTCCTTCCGGTCGACTCAGCCATTTTTCTGGCCGCAGAAGGATCGAGGATGTCTTTTCGCGTTACATTAATCTCCCTGATCAAGAAAGAGAACATGCTCTGATTTTCCCTGAACAGAGCCGGCATCCTGATATCCATAACAGAGAGTATTTGCTTAGGATTCTGCAGCAGCTTAGAAGTGAAAATGATATTGCTCTTCAACTTGCCAAGAATTTGTTCTGTTCTCTATTGTTTCAATGGATTTTGCCCCCAAACAGTCCAGTATCTATCAACCCTGACATTGAGGAAATCCAACAAGAACTTGTAAGGTTACAACAACAGCTTCAAATGGCAGAGGAACAATTAAGGGCATATGAGCCAGACCCTCTCAGGCTTACAACTATGGTTGATATAGAATCCTGTGAGAAACAACTTGTTGACACATTAGCAAAAGTTGTGCAAAGAAAGGAATATCTATTGAGCAACCATTTATCTTATAATCCTTCTCCTCTACAGGCCCTGCCTTCATCTTTTGACAATGAAGTTGTCAATTGGCAGCTGCCTGATAGTGGTCAGAGCCAATCCCAAATGTTTGGTACTTCAGCAACTTTAAATCAACTCAGGGATCTTTCATCCACTGTGTATGATCCAATGTTGCAAGGAAGCATGTCAAATCCAAGTGGGGATGATTTTCAAGCCAGCTGGTCTCAAGCTTATACCTCTGCAGGGCTGCAGTCAAGCCCCTTGCAAACAACCTTGTATTCCCAAGTTCAGCATGGAATGGTGGGTCAAGAAATGATAAAAAATGAGGAGATGGAAATTCCAGCAGGGAACAGTAGTTCACATGGTCAAATTCAGAGCAAGGCGGGAGACAATGAAGGATCAAATTATGAGACCGGACTTGCTCAACTTAATGGGCAATGA
Protein:  
MGRVKLEIKRIENNTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSGRLSHFSGRRRIEDVFSRYINLPDQEREHALIFPEQSRHPDIHNREYLLRILQQLRSENDIALQLAKNLFCSLLFQWILPPNSPVSINPDIEEIQQELVRLQQQLQMAEEQLRAYEPDPLRLTTMVDIESCEKQLVDTLAKVVQRKEYLLSNHLSYNPSPLQALPSSFDNEVVNWQLPDSGQSQSQMFGTSATLNQLRDLSSTVYDPMLQGSMSNPSGDDFQASWSQAYTSAGLQSSPLQTTLYSQVQHGMVGQEMIKNEEMEIPAGNSSSHGQIQSKAGDNEGSNYETGLAQLNGQ